harb/tools/push3-evolution/evolve.sh
openhands 0496c94681 fix: address review findings in evolve.sh (#546)
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-03-11 22:06:18 +00:00

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#!/usr/bin/env bash
# =============================================================================
# evolve.sh — Push3 evolution orchestrator
#
# Outer evolutionary loop: generate candidates → score → select → repeat.
#
# Usage:
# ./tools/push3-evolution/evolve.sh \
# --seed optimizer_v3.push3 \
# --population 10 \
# --generations 5 \
# --mutation-rate 2 \
# --output evolved/
#
# Algorithm:
# 1. Initialize population: N copies of seed, each with M random mutations.
# 2. For each generation:
# a. Score all candidates via fitness.sh
# b. Log generation stats (min/max/mean fitness, best candidate)
# c. Select k survivors via tournament selection (k = population/2)
# d. Generate next population: mutate survivors + crossover pairs
# 3. Output best candidate as Push3 file.
# 4. Show diff: original vs evolved (which constants changed, by how much).
#
# Output:
# <output>/
# generation_0.jsonl {candidate_id, fitness, mutations_applied}
# generation_1.jsonl
# ...
# best.push3 highest-fitness program
# diff.txt parameter changes vs original
# evolution.log full run log
#
# Environment:
# ANVIL_FORK_URL Passed through to fitness.sh when Anvil is not running.
#
# TSX resolution order: tsx in PATH → node_modules/.bin/tsx → npx tsx.
# =============================================================================
set -euo pipefail
SCRIPT_DIR="$(cd "$(dirname "$0")" && pwd)"
FITNESS_SH="$SCRIPT_DIR/fitness.sh"
MUTATE_CLI="$SCRIPT_DIR/mutate-cli.ts"
# =============================================================================
# Argument parsing
# =============================================================================
SEED=""
POPULATION=10
GENERATIONS=5
MUTATION_RATE=2
OUTPUT_DIR=""
while [[ $# -gt 0 ]]; do
case $1 in
--seed) SEED="$2"; shift 2 ;;
--population) POPULATION="$2"; shift 2 ;;
--generations) GENERATIONS="$2"; shift 2 ;;
--mutation-rate) MUTATION_RATE="$2"; shift 2 ;;
--output) OUTPUT_DIR="$2"; shift 2 ;;
*) echo "Unknown option: $1" >&2; exit 2 ;;
esac
done
if [ -z "$SEED" ]; then echo "Error: --seed required" >&2; exit 2; fi
if [ -z "$OUTPUT_DIR" ]; then echo "Error: --output required" >&2; exit 2; fi
if [ ! -f "$SEED" ]; then echo "Error: seed file not found: $SEED" >&2; exit 2; fi
# Validate numeric args
for _name_val in "population:$POPULATION" "generations:$GENERATIONS" "mutation-rate:$MUTATION_RATE"; do
_name="${_name_val%%:*}"
_val="${_name_val##*:}"
if ! [[ "$_val" =~ ^[0-9]+$ ]] || [ "$_val" -lt 1 ]; then
echo "Error: --${_name} must be a positive integer (got: $_val)" >&2
exit 2
fi
done
# Canonicalize paths
SEED="$(cd "$(dirname "$SEED")" && pwd)/$(basename "$SEED")"
mkdir -p "$OUTPUT_DIR"
OUTPUT_DIR="$(cd "$OUTPUT_DIR" && pwd)"
LOG="$OUTPUT_DIR/evolution.log"
# =============================================================================
# Helpers
# =============================================================================
log() {
local msg="[evolve] $*"
echo "$msg" >&2
echo "$msg" >> "$LOG"
}
fail() {
log "ERROR: $*"
exit 2
}
# Locate a tsx runner (TypeScript executor for mutate-cli.ts).
# Tries: tsx in PATH → local node_modules → npx tsx.
find_tsx_cmd() {
if command -v tsx &>/dev/null; then
echo "tsx"
elif [ -x "$SCRIPT_DIR/node_modules/.bin/tsx" ]; then
echo "$SCRIPT_DIR/node_modules/.bin/tsx"
elif command -v npx &>/dev/null; then
echo "npx tsx"
else
return 1
fi
}
# Run the mutate-cli.ts with the given arguments.
# All mutation operations run from SCRIPT_DIR so relative TS imports resolve.
run_mutate_cli() {
(cd "$SCRIPT_DIR" && $TSX_CMD "$MUTATE_CLI" "$@")
}
# Integer min/max/mean via python3 (bash arithmetic overflows on wei values).
py_stats() {
# Args: space-separated integers on stdin as a Python list literal
python3 - "$@" <<'PYEOF'
import sys
nums = [int(x) for x in sys.stdin.read().split()]
if not nums:
print("0 0 0")
sys.exit(0)
print(min(nums), max(nums), round(sum(nums) / len(nums)))
PYEOF
}
# Tournament selection: given a scores file (one "idx score filepath" per line),
# run k tournaments of size 2 and return winner filepaths (one per line).
py_tournament() {
local k="$1"
local scores_file="$2"
python3 - "$k" "$scores_file" <<'PYEOF'
import sys, random
k = int(sys.argv[1])
entries = []
with open(sys.argv[2]) as f:
for line in f:
parts = line.rstrip('\n').split('\t')
if len(parts) >= 3:
entries.append((int(parts[0]), int(parts[1]), parts[2]))
if not entries:
sys.exit(1)
for _ in range(k):
a = random.choice(entries)
b = random.choice(entries)
winner = a if a[1] >= b[1] else b
print(winner[2])
PYEOF
}
# =============================================================================
# Tool checks
# =============================================================================
for _tool in python3 node; do
command -v "$_tool" &>/dev/null || fail "$_tool not found in PATH"
done
[ -f "$FITNESS_SH" ] || fail "fitness.sh not found at $FITNESS_SH"
[ -f "$MUTATE_CLI" ] || fail "mutate-cli.ts not found at $MUTATE_CLI"
[ -x "$FITNESS_SH" ] || chmod +x "$FITNESS_SH"
TSX_CMD="$(find_tsx_cmd)" || fail \
"No TypeScript runner found. Install tsx (npm install -g tsx) or ensure npx is in PATH."
# =============================================================================
# Work directory — holds all candidate .push3 files across generations
# =============================================================================
WORK_DIR="$(mktemp -d)"
cleanup() { rm -rf "$WORK_DIR"; }
trap cleanup EXIT
# =============================================================================
# Log run header
# =============================================================================
log "========================================================"
log "Push3 Evolution — $(date -u '+%Y-%m-%dT%H:%M:%SZ')"
log " Seed: $SEED"
log " Population: $POPULATION"
log " Generations: $GENERATIONS"
log " Mutation rate: $MUTATION_RATE"
log " Output: $OUTPUT_DIR"
log " TSX: $TSX_CMD"
log "========================================================"
# =============================================================================
# Step 1 — Initialize generation 0
#
# N copies of the seed, each independently mutated MUTATION_RATE times.
# =============================================================================
log ""
log "=== Initializing population ==="
GEN_DIR="$WORK_DIR/gen_0"
mkdir -p "$GEN_DIR"
for i in $(seq 0 $((POPULATION - 1))); do
CAND_FILE="$GEN_DIR/candidate_$(printf '%03d' $i).push3"
MUTATED=$(run_mutate_cli mutate "$SEED" "$MUTATION_RATE") \
|| fail "Failed to mutate seed for initial candidate $i"
printf '%s\n' "$MUTATED" > "$CAND_FILE"
printf '%d\n' "$MUTATION_RATE" > "${CAND_FILE%.push3}.ops"
done
log "Initialized ${POPULATION} candidates in gen_0"
# =============================================================================
# Step 2 — Evolution loop
# =============================================================================
GLOBAL_BEST_FITNESS=-1
GLOBAL_BEST_GEN=-1
GLOBAL_BEST_CAND=""
CURRENT_GEN_DIR="$GEN_DIR"
for gen in $(seq 0 $((GENERATIONS - 1))); do
log ""
log "=== Generation $((gen + 1)) / $GENERATIONS ==="
JSONL_FILE="$OUTPUT_DIR/generation_${gen}.jsonl"
SCORES_FILE="$WORK_DIR/scores_gen_${gen}.txt"
# --- a. Score all candidates ---
SCORE_VALUES=""
CAND_COUNT=0
for CAND_FILE in "$CURRENT_GEN_DIR"/candidate_*.push3; do
[ -f "$CAND_FILE" ] || continue
CAND_IDX="${CAND_FILE##*candidate_}"
CAND_IDX="${CAND_IDX%.push3}"
CID="gen${gen}_c${CAND_IDX}"
# Read mutations_applied from sidecar; default 0 if missing.
OPS_FILE="${CAND_FILE%.push3}.ops"
MUTATIONS_APPLIED=0
[ -f "$OPS_FILE" ] && MUTATIONS_APPLIED=$(cat "$OPS_FILE")
SCORE=0
FITNESS_EC=0
SCORE=$(bash "$FITNESS_SH" "$CAND_FILE" 2>/dev/null) || FITNESS_EC=$?
# Exit 2 = infrastructure error (Anvil down, missing tools): abort immediately.
if [ "$FITNESS_EC" -eq 2 ]; then
fail "fitness.sh reported an infrastructure error (exit 2) — aborting evolution"
fi
# Validate that score is a non-negative integer; treat any other output as invalid.
if [ "$FITNESS_EC" -ne 0 ] || ! [[ "$SCORE" =~ ^[0-9]+$ ]]; then
log " $CID: invalid candidate (fitness.sh exit $FITNESS_EC), score=0"
SCORE=0
else
log " $CID: fitness=$SCORE"
fi
# Append to JSONL — use the actual operations recorded for this candidate.
printf '{"candidate_id":"%s","fitness":%s,"mutations_applied":%d}\n' \
"$CID" "$SCORE" "$MUTATIONS_APPLIED" >> "$JSONL_FILE"
# Record index, score, and filepath for selection (tab-delimited so paths with spaces are safe).
printf '%d\t%s\t%s\n' "$CAND_COUNT" "$SCORE" "$CAND_FILE" >> "$SCORES_FILE"
SCORE_VALUES="$SCORE_VALUES $SCORE"
CAND_COUNT=$((CAND_COUNT + 1))
done
if [ "$CAND_COUNT" -eq 0 ]; then
fail "No candidates found in $CURRENT_GEN_DIR"
fi
# --- b. Log generation stats ---
read -r MIN MAX MEAN < <(printf '%s' "$SCORE_VALUES" | py_stats)
log " Stats: min=$MIN max=$MAX mean=$MEAN candidates=$CAND_COUNT"
# Find best candidate for this generation (filepath returned directly).
BEST_FILE_THIS_GEN=$(python3 - "$SCORES_FILE" <<'PYEOF'
import sys
entries = []
with open(sys.argv[1]) as f:
for line in f:
parts = line.rstrip('\n').split('\t')
if len(parts) >= 3:
entries.append((int(parts[1]), parts[2]))
if not entries:
sys.exit(1)
print(max(entries, key=lambda x: x[0])[1])
PYEOF
) || fail "Could not determine best candidate from $SCORES_FILE"
if [ "$MAX" -gt "$GLOBAL_BEST_FITNESS" ] || [ "$GLOBAL_BEST_FITNESS" -eq -1 ]; then
GLOBAL_BEST_FITNESS="$MAX"
GLOBAL_BEST_GEN="$gen"
GLOBAL_BEST_CAND="$BEST_FILE_THIS_GEN"
log " New global best: gen=$gen fitness=$GLOBAL_BEST_FITNESS file=$(basename "$BEST_FILE_THIS_GEN")"
fi
# Skip next-generation creation after the final generation
[ "$gen" -eq "$((GENERATIONS - 1))" ] && break
# --- c. Tournament selection (k = population / 2) ---
K=$((POPULATION / 2))
[ "$K" -lt 1 ] && K=1
SURVIVOR_FILES=()
while IFS= read -r WIN_FILE; do
SURVIVOR_FILES+=("$WIN_FILE")
done < <(py_tournament "$K" "$SCORES_FILE")
log " Selected ${#SURVIVOR_FILES[@]} survivors via tournament"
# --- d. Generate next population ---
NEXT_GEN_DIR="$WORK_DIR/gen_$((gen + 1))"
mkdir -p "$NEXT_GEN_DIR"
NEXT_IDX=0
HALF=$((POPULATION / 2))
# First half: mutate random survivors
for _i in $(seq 1 $HALF); do
SUR="${SURVIVOR_FILES[$((RANDOM % ${#SURVIVOR_FILES[@]}))]}"
DEST="$NEXT_GEN_DIR/candidate_$(printf '%03d' $NEXT_IDX).push3"
if MUTATED=$(run_mutate_cli mutate "$SUR" "$MUTATION_RATE" 2>/dev/null); then
printf '%s\n' "$MUTATED" > "$DEST"
printf '%d\n' "$MUTATION_RATE" > "${DEST%.push3}.ops"
else
# Fallback: copy the survivor as-is to keep population size stable
cp "$SUR" "$DEST"
printf '0\n' > "${DEST%.push3}.ops"
fi
NEXT_IDX=$((NEXT_IDX + 1))
done
# Second half: crossover random survivor pairs
REMAINING=$((POPULATION - HALF))
for _i in $(seq 1 $REMAINING); do
SUR_A="${SURVIVOR_FILES[$((RANDOM % ${#SURVIVOR_FILES[@]}))]}"
SUR_B="${SURVIVOR_FILES[$((RANDOM % ${#SURVIVOR_FILES[@]}))]}"
DEST="$NEXT_GEN_DIR/candidate_$(printf '%03d' $NEXT_IDX).push3"
if CROSSED=$(run_mutate_cli crossover "$SUR_A" "$SUR_B" 2>/dev/null); then
printf '%s\n' "$CROSSED" > "$DEST"
printf '0\n' > "${DEST%.push3}.ops"
else
# Fallback: mutate one survivor
if MUTATED=$(run_mutate_cli mutate "$SUR_A" "$MUTATION_RATE" 2>/dev/null); then
printf '%s\n' "$MUTATED" > "$DEST"
printf '%d\n' "$MUTATION_RATE" > "${DEST%.push3}.ops"
else
cp "$SUR_A" "$DEST"
printf '0\n' > "${DEST%.push3}.ops"
fi
fi
NEXT_IDX=$((NEXT_IDX + 1))
done
log " Generated ${NEXT_IDX} candidates for generation $((gen + 1))"
CURRENT_GEN_DIR="$NEXT_GEN_DIR"
done
# =============================================================================
# Step 3 — Output best candidate
# =============================================================================
if [ -z "$GLOBAL_BEST_CAND" ] || [ ! -f "$GLOBAL_BEST_CAND" ]; then
fail "No valid best candidate recorded — evolution produced no scorable output"
fi
BEST_OUTPUT="$OUTPUT_DIR/best.push3"
cp "$GLOBAL_BEST_CAND" "$BEST_OUTPUT"
log ""
log "Best candidate → $BEST_OUTPUT"
log " Fitness: $GLOBAL_BEST_FITNESS (generation $GLOBAL_BEST_GEN)"
# =============================================================================
# Step 4 — Diff: original vs evolved constants
# =============================================================================
DIFF_OUTPUT="$OUTPUT_DIR/diff.txt"
python3 - "$SEED" "$BEST_OUTPUT" > "$DIFF_OUTPUT" <<'PYEOF'
import sys, re
def extract_ints(path):
"""Extract all large integer literals (≥6 digits) from a Push3 file."""
text = open(path).read()
text = re.sub(r';;[^\n]*', '', text) # strip comments
return [int(m) for m in re.findall(r'\b(\d{6,})\b', text)]
seed_path, best_path = sys.argv[1], sys.argv[2]
orig = extract_ints(seed_path)
best = extract_ints(best_path)
print(f"=== Push3 Evolution Diff ===")
print(f"Seed: {seed_path}")
print(f"Best: {best_path}")
print()
changed = 0
for i, (o, b) in enumerate(zip(orig, best)):
if o != b:
pct = (b - o) / o * 100 if o != 0 else float('inf')
print(f" const[{i:3d}]: {o:>25d} → {b:>25d} (Δ={b - o:+d}, {pct:+.2f}%)")
changed += 1
if len(orig) != len(best):
added = len(best) - len(orig)
if added > 0:
for i, val in enumerate(best[len(orig):]):
print(f" const[{len(orig) + i:3d}]: {'(new)':>25s} → {val:>25d}")
else:
print(f" ({-added} constant(s) removed from end)")
print()
if changed == 0 and len(orig) == len(best):
print("No constant changes — evolution applied structural mutations only.")
else:
total = min(len(orig), len(best))
print(f"Summary: {changed} of {total} constant(s) changed.")
PYEOF
log "Diff written to $DIFF_OUTPUT"
log ""
cat "$DIFF_OUTPUT" >&2
log "========================================================"
log "Evolution complete."
log " Generations run: $GENERATIONS"
log " Best fitness: $GLOBAL_BEST_FITNESS"
log " Best from gen: $GLOBAL_BEST_GEN"
log " Output directory: $OUTPUT_DIR"
log "========================================================"